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  • Getting started
  • User Guide
  • API reference
  • Changelog

Section Navigation

  • Code examples
    • Cube example
    • Cube example distance analysis
    • Dihedral to cartesian diubi
    • Dihedral to cartesian diubi analysis
    • Trp cage
  • Starter notebooks
    • Cube Example - Basic Usage
    • Asp7 Example - Advanced Usage
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  • Learn how to Customize EncoderMap
    • Learning Rate Scheduler
    • Logging Custom Images
    • Writing Custom Loss Functions
    • Logging Custom Scalars
  • Intermediate notebooks
    • Training with different topologies
  • Learn how EncoderMap handles MD data and trajectory ensembles

Code examples#

Here are some useful code examples: :ref:cube

  • Cube example
  • Cube example distance analysis
  • Dihedral to cartesian diubi
  • Dihedral to cartesian diubi analysis
  • Trp cage

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